BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G12LP1|AL429808
(926 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1072 1339 0.0
>3x_Contig1072
Length = 5702
Score = 1339 bits (675), Expect = 0.0
Identities = 720/729 (98%), Gaps = 5/729 (0%)
Strand = Plus / Plus
Query: 201 tttttgttggaatatgcaccaaa-tggcgatttattatctcttatgagaaagcatggttc 259
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4 tttttgttggaatatgcaccaaaatggcgatttattatctcttatgagaaagcatggttc 63
Query: 260 agtcaatgaaaaatgtacacagtactatgcagcacaaataatcgatgcattaggtttcat 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 agtcaatgaaaaatgtacacagtactatgcagcacaaataatcgatgcattaggtttcat 123
Query: 320 gcatgacaagggagtgat-acatagagacttgaaaccagaaaatatcttgttagacgttg 378
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gcatgacaagggagttattacatagagacttgaaaccagaaaatatcttgttagacgttg 183
Query: 379 atatgaaagtcaagttaactgattttggtactgcaaggcttctagatagtacttcggagg 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atatgaaagtcaagttaactgattttggtactgcaaggcttctagatagtacttcggagg 243
Query: 439 atgaccttaagtacgatctgttgacaagatctaactcctttgttggcacagcagaatatg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgaccttaagtacgatctgttgacaagatctaactcctttgttggcacagcagaatatg 303
Query: 499 tatcaccagaattgttgaatgataactacgttgattttaggtgtgacatttgggcatttg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tatcaccagaattgttgaatgataactacgttgattttaggtgtgacatttgggcatttg 363
Query: 559 gttgcattctttt-ccaaatgatagccgggaaaccgccatttaaggcgaacaatgaatat 617
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 364 gttgcattctttttccaaatgatagccgggaaaccgccatttaaggcgaacaatgaattt 423
Query: 618 ttgacattccagaaggtaatgaaagttcaatttgcttttaccgctggcttcccaatgact 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttgacattccagaaggtaatgaaagttcaatttgcttttaccgctggcttcccaatgact 483
Query: 678 gtgagagatttggtgaaaaatattctaattaaaaacccagaaagaagattgctgatcaat 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtgagagatttggtgaaaaatattctaattaaaaacccagaaagaagattgctgatcaat 543
Query: 738 caaattaaagctcaccagtttttcgccgatgtaaacttcggtaacggctcagtttgggat 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 caaattaaagctcaccagtttttcgccgatgtaaacttcggtaacggctcagtttgggat 603
Query: 798 aaaga-cccccagaacttggtccatacaaggtttccgcccgtgctttgcaatcctcggta 856
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aaagaccccccagaacttggtccatacaaggtttccgcccgtgctttgcaatcctcggta 663
Query: 857 ccgaagggggcctcgtctccggctattwatccaattcatgaacctgttcgacaaagctca 916
||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 664 ccgaa-gtggcctcgtctccggctattaatccaattcatgaacctgttcgacaaagctca 722
Query: 917 gtatcaccg 925
|||||||||
Sbjct: 723 gtatcaccg 731
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7851
Number of Sequences: 1807
Number of extensions: 7851
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)